This page is a curated set of research software, academic collaborations, and a small number of applied-research projects. It is not a complete list of GitHub repositories or commercial engagements. Industrial work is described by the research problem and methods.
Research software and studies
Research on separating population-size variation from population structure using coalescent models and the inverse instantaneous coalescence rate.
Researcher and co-author · INSA Toulouse / Institut de Mathématiques de Toulouse
Coalescent theory · IICR · Identifiability · Simulation
Research software and studies
Software for automatic construction of order-robust genetic linkage maps, developed with colleagues at INRAE and collaborators.
Co-author · INRAE
Linkage mapping · Combinatorial optimisation · Reproducible software
Academic collaborations and mentoring
Ongoing work on comparing transformer-based embeddings and classical topic models for interpretable analysis of large text corpora.
Researcher and mentor
Topic modelling · Transformer embeddings · Coherence measures · Representation learning
Selected applied research
Applied research on decision support, imaging and clinical data workflows, and privacy-aware deployment in healthcare settings.
Applied AI researcher · Torus
Medical imaging · Decision support · Privacy-aware workflows · Generative models
Selected applied research
Applied research combining learned components with classical filtering and signal-processing methods for satellite positioning.
Applied AI researcher · Torus
Signal processing · Neural filtering · GNSS · Hybrid models
Selected applied research
Current applied-research direction on retrieval, tool use, orchestration, and human-in-the-loop processes for specialised language systems.
Applied AI researcher · Torus
Large language models · Retrieval-augmented generation · Tool use · Orchestration
Research software
Legacy research software for estimating IICR curves from coalescent simulations and for applying PSMC to ms-simulated data.
Author
Coalescent simulation · PSMC · Reproducible scripts